# A tibble: 6 × 16
label Group numOtus Otu01 Otu02 Otu03 Otu04 Otu05 Otu06 Otu07 Otu08 Otu09
<dbl> <chr> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
1 0.03 F3D0 13 1 0 0 0 0 0 0 0 0
2 0.03 F3D1 13 0 1 0 0 0 0 0 0 0
3 0.03 F3D141 13 1 1 0 0 0 0 0 0 0
4 0.03 F3D144 13 1 0 0 1 0 0 0 0 0
5 0.03 F3D147 13 1 0 1 0 0 0 0 0 0
6 0.03 F3D148 13 0 0 1 0 0 1 0 0 1
# … with 4 more variables: Otu10 <dbl>, Otu11 <dbl>, Otu12 <dbl>, Otu13 <dbl>
# A tibble: 6 × 3
sample_id otu count
<chr> <chr> <dbl>
1 F3D0 otu01 1
2 F3D1 otu02 1
3 F3D141 otu01 1
4 F3D141 otu02 1
5 F3D141 otu10 1
6 F3D144 otu01 1
# A tibble: 6 × 11
otu F3D0 F3D1 F3D141 F3D144 F3D147 F3D148 F3D2 F3D6 F3D8 M1D1
<chr> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
1 otu01 1 0 1 1 1 0 0 0 0 0
2 otu02 0 1 1 0 0 0 0 0 0 1
3 otu10 0 0 1 0 0 0 0 0 0 0
4 otu04 0 0 0 1 0 0 0 0 0 2
5 otu03 0 0 0 0 1 1 0 0 0 1
6 otu06 0 0 0 0 0 1 0 0 0 1
[1] "Dimension of the phylotype table table is 13 rows and 11 columns"
# A tibble: 6 × 3
OTU Size Taxonomy
<chr> <dbl> <chr>
1 Otu01 4 Bacteria(100);Bacteroidetes(100);Bacteroidia(100);Bacteroidales(1…
2 Otu02 3 Bacteria(100);Bacteroidetes(100);Bacteroidia(100);Bacteroidales(1…
3 Otu03 3 Bacteria(100);Bacteroidetes(100);Bacteroidia(100);Bacteroidales(1…
4 Otu04 3 Bacteria(100);Bacteroidetes(100);Bacteroidia(100);Bacteroidales(1…
5 Otu05 2 Bacteria(100);Bacteroidetes(100);Bacteroidia(100);Bacteroidales(1…
6 Otu06 2 Bacteria(100);Bacteroidetes(100);Bacteroidia(100);Bacteroidales(1…
# A tibble: 6 × 8
otu pretty_otu kingdom phylum class order family genus
<chr> <chr> <chr> <chr> <chr> <chr> <chr> <chr>
1 otu01 OTU 1 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porph… Barn…
2 otu02 OTU 2 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porph… Porp…
3 otu03 OTU 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porph… Porp…
4 otu04 OTU 4 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porph… Porp…
5 otu05 OTU 5 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porph… Porp…
6 otu06 OTU 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porph… Porp…